{"id":416,"date":"2021-04-04T11:53:29","date_gmt":"2021-04-04T02:53:29","guid":{"rendered":"https:\/\/osmanthus.work\/?p=416"},"modified":"2021-04-04T11:53:30","modified_gmt":"2021-04-04T02:53:30","slug":"paper-reading-memo-database-system-support-of-simulation-data","status":"publish","type":"post","link":"https:\/\/osmanthus.work\/?p=416","title":{"rendered":"Paper reading memo: Database System Support of Simulation Data"},"content":{"rendered":"\n<h2 class=\"wp-block-heading\">1. Memo<\/h2>\n\n\n\n<h3 class=\"wp-block-heading\">(1)  The goal of this paper<\/h3>\n\n\n\n<p>  The goal of this paper is to accelarate visualization and quantitive analysis of simulation data. <\/p>\n\n\n\n<h3 class=\"wp-block-heading\">(2) What simulation data is<\/h3>\n\n\n\n<p>  A simulation is forecasting or estimating numerical value as velocity and pressure etc. at each 3D space corrdinate and each time in area such as astronomy; medicine; biology.  A simulation solves a set of differential equations at an initial condition through discretization of the space. A set of simulation data are point clouds using several initial conditions of differential equation. Size of simulation data may become terabytes.<\/p>\n\n\n\n<h3 class=\"wp-block-heading\">(3) What quantitive analysis of simulation data is<\/h3>\n\n\n\n<p> An example of quantitive analysis is aggregation of distance between simulation value and reference value.<\/p>\n\n\n\n<h3 class=\"wp-block-heading\">(4) Challenge<\/h3>\n\n\n\n<p> Row store is inadequate for analytical query. Array DBMS such as SciDB can intuitive represent simulation data because a set of simulation data is multidimensional array. However a naive managing approach produce sparse array so cannnot accelarate analytical queries when using discretization of the space with irregular meshes.<\/p>\n\n\n\n<h3 class=\"wp-block-heading\">(5) Approach<\/h3>\n\n\n\n<p>When simulation data is fit in memory: managing data using in-memory column store such as MonetDB. Otherwise mapping simulation data to evenly distributed storage blocks using equi-depth histogram and space filling curves.<\/p>\n\n\n\n<h2 class=\"wp-block-heading\">2. References<\/h2>\n\n\n\n<p>[1] H. Lustosa, F. Porto, P. Blanco, Database System Support of Simulation Data, PVLDB2016.<br><a href=\"https:\/\/www.vldb.org\/pvldb\/vol9\/p1329-lustosa.pdf\">https:\/\/www.vldb.org\/pvldb\/vol9\/p1329-lustosa.pdf<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p>1. Memo (1) The goal of this paper The goal of this paper is to accelarate visualization and quantitive analysis of simulation data. (2) What simulation data is A simulation is forecasting or estimating numerical value as velocity and pressure etc. at each 3D space corrdinate and each time in area such as astronomy; medicine; [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"_jetpack_memberships_contains_paid_content":false,"footnotes":""},"categories":[1],"tags":[],"class_list":["post-416","post","type-post","status-publish","format-standard","hentry","category-uncategorized","entry"],"jetpack_featured_media_url":"","jetpack_sharing_enabled":true,"_links":{"self":[{"href":"https:\/\/osmanthus.work\/index.php?rest_route=\/wp\/v2\/posts\/416","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/osmanthus.work\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/osmanthus.work\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/osmanthus.work\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/osmanthus.work\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=416"}],"version-history":[{"count":17,"href":"https:\/\/osmanthus.work\/index.php?rest_route=\/wp\/v2\/posts\/416\/revisions"}],"predecessor-version":[{"id":433,"href":"https:\/\/osmanthus.work\/index.php?rest_route=\/wp\/v2\/posts\/416\/revisions\/433"}],"wp:attachment":[{"href":"https:\/\/osmanthus.work\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=416"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/osmanthus.work\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=416"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/osmanthus.work\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=416"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}